KEGG   Sus scrofa (pig): 397377
Entry
397377            CDS       T01009                                 
Symbol
CACNA2D1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 preproprotein
  KO
K04858  voltage-dependent calcium channel alpha-2/delta-1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04010  MAPK signaling pathway
ssc04260  Cardiac muscle contraction
ssc04261  Adrenergic signaling in cardiomyocytes
ssc04921  Oxytocin signaling pathway
ssc05410  Hypertrophic cardiomyopathy
ssc05412  Arrhythmogenic right ventricular cardiomyopathy
ssc05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    397377 (CACNA2D1)
 09150 Organismal Systems
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    397377 (CACNA2D1)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    397377 (CACNA2D1)
   04261 Adrenergic signaling in cardiomyocytes
    397377 (CACNA2D1)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    397377 (CACNA2D1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    397377 (CACNA2D1)
   05414 Dilated cardiomyopathy
    397377 (CACNA2D1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    397377 (CACNA2D1)
Ion channels [BR:ssc04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   397377 (CACNA2D1)
SSDB
Motif
Pfam: VGCC_alpha2 VWA_N VWA VWA_3 VWA_2 dCache_1 IFN-gamma
Other DBs
NCBI-GeneID: 397377
NCBI-ProteinID: NP_999348
Ensembl: ENSSSCG00000015402
UniProt: O77773
Position
9:97781057..98265925
AA seq 1091 aa
MAAGCLLALTLTLFQSLLIGPSSQEPFPSAVTIKSWVDKMQEDLVTLAKTASGVNQLVDI
YEKYQDLYTVEPNNARQLVEIAARDIEKLLSNRSKALVRLALEAEKVQAAHQWREDFASN
EVVYYNAKDDLDPEKNDSEPGSQRIKPVFIDDANFGRQISYQHAAVHIPTDIYEGSTIVL
NELNWTSALDEVFKKNREEDPSLLWQVFGSATGLARYYPASPWVDNSRTPNKIDLYDVRR
RPWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQD
VSCFQHLVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRANCNKIIML
FTDGGEERAQEIFAKYNKDKKVRVFTFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIR
INTQEYLDVLGRPMVLAGDKAKQVQWTNVYLDALELGLVITGTLPVFNITGQNENKTNLK
NQLILGVMGVDVSLEDIKRLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKNPKSQEPVTL
DFLDAELENDIKVEIRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSL
ALVLPTYSFYYIKAKIEETITQARSKKGKMKDSETLKPDNFEESGYTFIAPRDYCNDLKI
SDNNTEFLLNFNEFIDRKTPNNPSCNTDLINRVLLDAGFTNELVQNYWSKQKNIKGVKAR
FVVTDGGITRVYPKEAGENWQENPETYEDSFYKRSLDNDNYVFTAPYFNKSGPGAYESGI
MVSKAVEIYIQGKLLKPAVVGIKIDVNSWIENFTKTSIRDPCAGPVCDCKRNSDVMDCVI
LDDGGFLLMANHDDYTNQIGRFFGEIDPSLMRHLVNISVYAFNKSYDYQSVCEPGAAPKQ
GAGHRSAYVPSIADILHIGWWATAAAWSILQQFLLSLTFPRLLEAVEMEDDDFTASLSKQ
SCITEQTQYFFDNDSKSFSGVLDCGNCSRIFHVEKLMNTNLIFIMVESKGTCPCDTRLLI
QAEQTSDGPDPCDMVKQPRYRKGPDVCFDNNALEDYTDCGGVSGLNPSLWSIFGIQCVLL
WLLSGSRHYQL
NT seq 3276 nt   +upstreamnt  +downstreamnt
atggctgctggctgcctgctggccttgactctgacacttttccaatctttgctgatcggt
ccctcatcgcaggagccgttcccgtcggccgtcactatcaagtcatgggtggataaaatg
caagaagaccttgtcaccctggcaaaaacagcaagtggagtcaatcagcttgtcgatatt
tatgaaaaataccaagatttgtatactgtggaaccaaataatgcacgccagctggtggaa
attgcagccagggatattgagaaacttctgagcaacagatctaaagccctggtgcgccta
gctttggaagcagagaaggttcaagcagcccaccagtggagagaggattttgcaagcaat
gaagttgtctactacaatgcaaaggatgatctcgatcctgaaaaaaatgacagtgagcca
ggcagccagaggataaaacctgtttttattgatgatgctaattttgggcgacagatatct
tatcagcatgcagcagtccatattcccaccgacatctatgagggctcaacaattgtgtta
aatgaactgaactggacaagtgccttagatgaagttttcaagaaaaatcgagaggaagat
ccctcattattgtggcaggtgtttggcagtgccacaggcctggcccggtattatccagct
tctccatgggttgataacagtagaactccaaacaagattgacctttatgatgtacgaagg
agaccatggtacatccaaggagctgcatctcctaaagatatgcttattctggtcgacgtg
agtggaagtgttagtggtttgacgcttaaactgatccgaacatctgtctctgaaatgttg
gaaaccctctcagatgacgattttgtgaatgtagcttcatttaacagcaatgcccaggat
gtaagctgttttcaacaccttgtccaagcaaatgtaagaaataagaaagtgctgaaagat
gcagttaataatatcacagcaaaaggaatcacagattacaagaagggctttagttttgct
tttgaacaactgcttaattataacgtttctagagccaactgcaataagattatcatgttg
ttcaccgatggaggagaagagagagctcaggagatatttgccaaatacaacaaagacaaa
aaagtacgtgtattcacattttcagttggtcaacataattatgacagaggacctattcag
tggatggcctgtgaaaataaaggttattattatgaaattccttccattggagcaatcaga
atcaatactcaggaatatttggatgttctgggaagaccaatggttttagcaggagacaaa
gctaagcaagtccagtggacaaacgtgtacctggatgcactggaactgggacttgtcatt
actggaactcttccggtcttcaacataaccggccaaaatgaaaataagacgaacttaaag
aaccagctgattcttggtgtgatgggagttgatgtatctttggaagatattaaaagactg
acaccacgttttacactgtgccccaatggctattactttgcaattgatcctaatggctat
gttttattacatccaaatcttcagccaaagaaccccaaatctcaggagccagtaaccttg
gatttccttgatgcagaattagagaatgatattaaagtggagatccgaaataaaatgata
gatggagaaagtggagaaaaaacattcagaactctggttaaatctcaagatgagagatat
attgacaaaggaaacaggacatatacatggactcctgtcaatggcacagattacagtttg
gccttggtattaccaacctacagtttttactatataaaagccaaaatagaagagacaata
actcaggccagatcaaaaaagggcaaaatgaaggattcagaaacactgaagcctgataat
tttgaagaatctggctatacattcatagcaccaagagactactgcaatgaccttaaaata
tcagataataataccgaatttcttttaaactttaatgagtttattgatagaaaaactcca
aacaacccgtcatgcaacacagatttgattaatagagtcttgctggatgcgggctttaca
aatgaacttgtccaaaattactggagtaagcagaaaaacatcaagggagtgaaagcacgg
tttgttgtaactgatggagggattaccagagtttatcccaaagaggctggagaaaattgg
caagaaaacccagaaacatatgaggacagcttctataaaagaagtctagataacgataac
tatgttttcactgctccctactttaacaaaagtggacctggtgcttatgaatcaggcatc
atggtaagcaaagctgtagaaatatacatccaaggaaaacttcttaaacctgcagttgtt
ggaattaaaattgatgtaaattcctggatagagaatttcaccaaaacatcaatcagggat
ccgtgtgctggtccagtttgtgattgtaaaagaaacagtgatgtaatggattgtgtgatt
ctagatgatggtgggtttcttttgatggcaaatcatgatgattatactaaccagattgga
aggttttttggagagattgacccaagtttgatgagacacctggttaatatatcagtttat
gcttttaacaaatcttacgattatcagtcagtgtgtgagcctggtgctgcaccaaaacaa
ggagcaggacatcgctcagcatatgtgccatcaatagcagacatcttacacattggctgg
tgggccactgcagctgcatggtctattctacagcagtttctcttgagtttgacctttcca
cgacttcttgaagcagttgagatggaagatgatgactttaccgcctctctgtcaaagcag
agttgcattactgaacaaacccagtatttctttgataatgatagcaaatccttcagtggg
gtcttggactgtggtaactgttccagaatctttcacgttgaaaaacttatgaacaccaac
ttaatattcataatggttgagagcaaagggacttgtccttgtgacacacgattgctcata
caagctgagcagacttctgacggtccagatccttgtgatatggttaagcaacccagatac
cgaaaagggcctgatgtctgttttgataacaatgccttggaggattataccgactgtggt
ggtgtttctggattaaatccctccctgtggtccatcttcggaatccagtgtgttttactt
tggcttttatctggcagcagacactaccagttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (22)   
   UniProt (1)   
   RefSeq(pep) (21)   
DNA sequence (25)   
   RefSeq(nuc) (21)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (79)   

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